Visible light-mediated photocatalysis is a powerful strategy in organic chemistry, enabling novel synthetic transformations. As photocatalysis is often performed under mild conditions and is compatible with water, it holds great potential for chemically manipulating biological systems. Our lab aims to develop new technologies that will enable photocatalysis inside living cells. Such chemical tools will provide invaluable information about Biology.
Photocatalysis requires a catalyst, usually a metal complex or an organic small-molecule dye. Such a catalyst does not naturally exist inside cells and needs to be provided exogenously, a demand that traditionally limits the applicability of photochemistry in vivo.
We asked ourselves – Can we use proteins, which are genetically encoded, as endogenous photocatalysts?
The answer is yes!
We recently developed LITag (https://www.pnas.org/doi/10.1073/pnas.2219339120), which relies on genetically encoded photocatalysts to achieve photo-proximity labeling. This method is used to study protein-protein interactions in living cells. We continue to design photo-proximity labeling tools that will deepen our understanding of protein-protein interaction regulation in various biological processes. In addition, we use our unique in vivo photochemistry approach to accomplish new chemical transformations in living cells.
Stay Tuned!
Genetic information in eukaryotes is stored in the form of chromatin, a complex of genomic DNA with histone and non-histone proteins. The structure and organization of chromatin are regulated by various epigenetic mechanisms, such as DNA methylation and the post-translational modifications (PTMs) of histones, that establish cellular identity.
To understand the chemistry of chromatin regulation, we and others use chemically customized chromatin.
Check out our recent review about this subjet!
We are currently developing new Chemical Biology tools that rely on chemically customized chromatin to achieve a better understanding of epigenetic regulation mechanisms. More to come.